Mirna
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JTreeview v.1.0
Tree file viewer fast and easy. JTreeview is a convenient, easy-to-use tool designed to help you view tree files. This viewer is limited to Newick format (or the custom save format, based on Newick).
MiRPI v.1.0
MicroRNAs (miRNAs) are newly discovered class of non-coding small RNAs of 20-24 nucleotide length that regulate gene and protein expression in plants and animals. MiRNAs have so far been identified mostly by specific cloning of small RNA molecules,
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BLATview v.1.0
View blast files. BLATview help you analyze blast files and enables you to view the alignments. The software has grown quite a bit since the beginning, so it has become less easy/intuitive to use, but MUCH more strong.Requirements: *
AlnEdit v.1.0
Edit alignments with this tool. AlnEdit is for protein sequences. AlnEdit is capable of handling large alignments (thousands of sequences) without slowing to a crawl and where sequence alignments could be edited by hand.A few features: 1. This is an
CLANS v.2
CLANS is a small tool written in Java for cluster analysis of sequences. Frequently, homology is used as a reason to transfer knowledge about function or structure from known to unknown proteins.
SSalign v.1.0
SSalign is a DNA/RNA alignment program. This software was developed due to a need to look at all possible stem-loop structures that a large number of DNA/RNA sequences could form.
SRNA Workbench 2.5.0 Beta v.1.0
RNA silencing is a complex, highly-conserved, transcriptional and post-transcriptional mechanism that tunes gene expression.